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This script allows you to find STR matches within public YSEQ projects, STRs from other sources entered in a tabular format and YFull samples.

Developed by Hunter Provyn in cooperation with YSEQ (Thomas Krahn and Yahya Alalie).

Video Tutorial

1. Load Project Samples

Load samples from YSEQ public projects, multiple tabular data sources, and YFULL samples
Loading a tabular data source deletes previously loaded YSEQ projects

YSEQ

Contact Your Match (enter ID to get group owner email)

Add External STR Project

Copy-Paste Entire STR Project Table(s)

from table on project page
from Google sheet
from text file saved to your computer

STR Project Paste

2. Query

Step 1: Enter Kit Number and click "Populate" OR paste STRs and click "Parse"
Step 2: Click "Find Matches"

Kit Number STRs Paste

Markers to Compare Genetic Distance Match Limit

Advanced

Ignore Ids Percent Identical STRs Cutoff For Automatic Grouping Automatic Grouping DisplayIDName
Restrict query to STRs in common with

3. Matches

Matches are ranked according to the log sum of their deviating mutations, weighted by each STR's mutation rate (thanks David Vance for mutation rates). For matching alleles, a color code shows the in-project rarity for the shared value.

Privacy Mask Check this to hide identifying information so you can make your screenshot public
Sort STRs By

Hide Fast STRs

Hide STRs with generational mutation rate exceeding

Hide STRs

Dendrogram

Samples For Dendrogram