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This script allows you to find STR matches within public YSEQ projects, STRs from other sources entered in a tabular format and YFull samples.

Developed by Hunter Provyn in cooperation with YSEQ (Thomas Krahn and Yahya Alalie).

Video Tutorial  

1. Load Project Samples

Load samples from YSEQ public projects, multiple tabular data sources, and YFULL samples
Loading a tabular data source deletes previously loaded YSEQ projects

YSEQ

Add External STR Project



Copy-Paste Entire STR Project Table(s)



2. Query

Step 1: Enter Kit Number and click "Populate" OR paste STRs and click "Parse"
Step 2: Click "Find Matches"






Advanced
IDName

3. Matches

Matches are ranked according to the log sum of their deviating mutations, weighted by each STR's mutation rate (thanks David Vance for mutation rates).
Since May 2024 it uses allele-specific mutation rates that I computed from YFull's computed haplotypes.
For matching alleles, a color code shows the in-project rarity for the shared value.
Privacy Mask Check this to hide identifying information so you can make your screenshot public

Hide Fast STRs
Hide STRs with generational mutation rate exceeding  

Hide STRs 

Dendrogram